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Transcript ID (JGIDOE)
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Gene model name (JGIDOE)
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Gene location (Scaffold: coordinates)
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Gene length (bp)
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Transcript accession number (GenBank)
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|---|
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250,480
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Physo2.s_448557
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2: 8065616–8,066,365
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750
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XM_009522292.1
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490,338
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e_gw1.3.5975.1
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3: 616457–617,545
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1089
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XM_009523709.1
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496,500
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e_gw1.3.444.1
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3: 629376–631,094
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1719
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XM_009523712.1
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496,964
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e_gw1.3.1590.1
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3: 637957–639,675
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1719
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XM_009523714.1
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331,456
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gm1.9368_g
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3: 8062164–8,062,970
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807
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XM_009526324.1
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496,814
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e_gw1.3.12703.1
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3: 8334020–8,334,784
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765
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XM_009526391.1
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493,125
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e_gw1.3.400.1
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3: 8378758–8,381,136
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2379
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XM_009526401.1
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491,970
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e_gw1.3.10053.1
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3: 8792464–8,793,633
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1170
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XM_009526560.1
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496,434
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e_gw1.3.1590.1
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3: 8800161–8,801,378
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1218
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XM_009526562.1
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336,457
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gm1.14369_g
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6: 690515–691,315
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801
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XM_009532098.1
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342,862
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gm1.20774_g
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13: 1387994–1,388,905
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912
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XM_009539509.1
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251,859
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Physo2.s_451592
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13: 1398588–1,399,443
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856
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XM_009539513.1
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- A total of 12 putative PL3-coding gene models were identified. Gene models encoding transcripts XM_009523712.1 and XM_009523714.1 have 100% nucleotide similarity. Therefore, expression analysis could be performed on 11 sequences, only. All of the gene models were confirmed to contain the PFAM domain PF03211, characteristic of the pectate lyase family. Transcript XM_009526560.1 (1170 bp) is located within a larger ORF (1317 nt) in the complementary strand
